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Related tools: GeneNest
SYSTERS

spliceNest: Visualizing Splicing of Genes from EST Data

Database: Human Hs7

New version! The previous version is available here.

The contigs are from the GeneNest assembly of the August 2003 version of the NCBI UniGene clustering of human genes.

The chromosomes are the April, 2003 freeze of the HUGO Golden Path assembly of the complete human genome.

Matches plotted along the chromosomes:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y
Lists sorted by cluster number in each chromosome:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y
Lists sorted by location in each chromosome:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y

Cluster search: (e.g. Hs635)   GeneNest detailed query
Tissue/tumor-specific alternative splicing: Supplementary data for (Gupta et al., BMC Genomics (2004))
Shobhit Gupta