The visualization is based on mappings of the GeneNest EST Contigs to genomic sequence.
Mappings for the following organisms are currently available:
See the help page for more information.
- References:
-
E. Coward, S.A. Haas, and M. Vingron (2002).
SpliceNest: visualization of gene structure and alternative
splicing based on EST clusters.
Trends Genet., 18 (1), 53-55.
- S.Gupta, D. Zink, B. Korn, M. Vingron and S.A. Haas (2004). Genome wide identification and classification of alternative splicing based on EST data. Bioinformatics, 20 (16), 2579-2585.
- S.Gupta, D. Zink, B. Korn, M. Vingron and S.A. Haas (2004). Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing. BMC Genomics, 5 (72).
- S.Gupta, M. Vingron and S.A. Haas (2005). T-STAG: Resource and web-interface for Tissue-Specific Transcripts And Genes. Nucleic Acids Research, 33, W654-W658.
- S.Gupta, D. Zink, B. Korn, M. Vingron and S.A. Haas (2004). Genome wide identification and classification of alternative splicing based on EST data. Bioinformatics, 20 (16), 2579-2585.
Shobhit Gupta